; When using this new tolopolgy, make sure you have included the required parameters ; (see http://swisssidechain.ch/MD/gromacs.html) [ D2MF ] ; 2-Methyl-phenylalanine [ atoms ] N NH1 -0.4700 0 HN H 0.3100 1 CA CT1 0.0700 2 HA HB 0.0900 3 CB CT2 -0.1800 4 HB1 HA 0.0900 5 HB2 HA 0.0900 6 CG CA 0.0000 7 CD2 CA -0.1150 8 HD2 HP 0.1150 9 CD1 CA 0.0000 10 CE2 CA -0.1150 11 HE2 HP 0.1150 12 CE1 CA -0.1150 13 HE1 HP 0.1150 14 CH CT3 -0.2700 15 HH1 HA 0.0900 16 HH2 HA 0.0900 17 HH3 HA 0.0900 18 CZ CA -0.1150 19 HZ HP 0.1150 20 C C 0.5100 21 O O -0.5100 22 [ bonds ] N HN N CA C CA C +N CA HA CB CA O C CG CB HB1 CB HB2 CB CE2 CD2 CG CD2 HD2 CD2 CE1 CD1 CH CD1 CG CD1 CZ CE2 CZ CE1 HH1 CH HH2 CH HH3 CH HZ CZ CE2 HE2 CE1 HE1 [ impropers ] N -C CA HN C CA +N O [ cmap ] -C N CA C +N